Our client, a leading global pharmaceutical company, is seeking a highly skilled and motivated Bioinformatics Scientist to join their international research organization, driving innovation across multiple therapeutic areas. In this role, you will design, evaluate, and optimize computational methods for large-scale next-generation sequencing (NGS) analysis, contributing directly to discovery and development programs. You will build robust, production-grade bioinformatics workflows for high-performance computing (HPC) clusters and cloud environments, collaborating closely with biologists, data scientists, and domain experts across Oncology, Immunology, Infectious Diseases & Vaccines, Neuroscience, and Pharmacokinetics.

Feel free to work remotely from anywhere across Latvia or connect with colleagues at our Riga office.

Responsibilities

• Develop, benchmark, and optimize computational methods to analyze diverse NGS datasets
• Build and maintain scalable, automated bioinformatics pipelines for HPC and cloud-based execution
• Partner with interdisciplinary scientific teams to translate research needs into reproducible analytical workflows
• Evaluate and implement new algorithms, tools, and computational strategies to enhance data processing capabilities
• Produce clear technical documentation, reports, and scientific deliverables

Requirements

• PhD with 1+ year of experience in bioinformatics, or MSc with 5+ years of relevant experience
• Hands-on experience processing NGS datasets (WGS, WES, RNA-seq, ChIP-seq, ATAC-seq, single-cell, etc)
• Practical experience with workflow/pipeline scripting languages (e.g., Nextflow)
• Strong understanding of computational methods for alignment, assembly, variant detection, enrichment, or related genomics applications
• Familiarity with common bioinformatics file formats (FASTA, FASTQ, BAM, VCF, etc)
• Proficiency in Python, R, or C++ within a Unix/Linux environment
• Experience with high-performance computing clusters and cloud computing platforms
• Ability to independently troubleshoot using documentation, GitHub, and online resources
• Proven scientific publication record
• Strong collaboration, communication, and interpersonal skills
• Excellent written and spoken English

Nice to have

• Experience with containerization technologies (Docker, Singularity)
• Experience applying or optimizing machine learning tools in a bioinformatics context

We offer

• Engineering Heritage: Best-in-class experts sharing a culture of engineering excellence and tackling complex engineering challenges for over 30 years.
• Advanced Tech Stack: Innovative projects where you can apply or enhance your expertise in Cloud, Data, AI, and other emerging technologies.
• World-Class Clients: Work closely with 295+ of the Forbes Global 2000 on creating disruptive solutions that make a global impact.
• Professional Growth: Exceptional support for career development with comprehensive resources for upskilling or reskilling in pioneering practices.
• GenAI Community: Strong AI competencies with 600+ experts across 55+ locations driving GenAI-enabled transformation journeys.
• Entrepreneurial Culture: If you're passionate and dedicated to improving business transformation, we provide the support you need to bring your ideas to life.
• Hybrid Setup: The flexibility to work from any location in Latvia, whether it's your home or our office in Riga.
• Other Benefits: Additional vacation and trust days, private health insurance, Employee Stock Purchase Plan and more.

About EPAM

EPAM is a leading global provider of digital platform engineering and development services. For over 30 years, our team has helped leading brands navigate the waves of digital transformation, building solutions that help them stay competitive through constant market disruption.With offices in 55+ countries, EPAM has grown in Latvia to over 150+ talented innovators in 3 years. We foster creativity and unconventional ways of doing things, welcoming like-minded professionals to join us.

Salary range €3.8K-€5.2K gross, based on your experience and interview results.